CS 482/682 Winter 2020
Time and Loc:
Tuesday and Thursday, 4:00-5:20pm. QNC-2501.
Lecturer's Office hours: Monday 3-4pm. DC3345.
Korkmaz, Mustafa (mkorkmaz), Office hour: Friday 2:30-3:30pm, DC2310.
Please read a separate outline at the link above, especially for the
assignment late policy, collaboration, and other ethical issues.
- Assignment 1. Release Jan. 21. Due Jan. 31.
- Assignment 2. Release Jan. 30. Due Feb. 13.
- Reading week. Feb. 18-21.
- Midterm. Feb. 25. 4-5:30pm, MC 4063.
- Assignment 3. Release Feb. 27. Due Mar. 10.
- Assignment 4. Release Mar. 12. Due Mar. 26.
Note: Efforts will be made to post notes before classes. But there
is no guarantee, and there may be last minute changes to the notes before the class.
- Sequence Alignment
- Slightly Modified Models for Sequence Alignment
- Score and Significane
- Multiple Sequence Alignment